Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SYN1P17600 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SYN1P17600 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SYN1P17600 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.86■□□□□ 0.29
SYN1P17600 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 AP003171.2-201ENST00000528208 925 ntBASIC16.86■□□□□ 0.29
SYN1P17600 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.86■□□□□ 0.29
SYN1P17600 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.86■□□□□ 0.29
SYN1P17600 RN7SL163P-201ENST00000583100 276 ntBASIC16.86■□□□□ 0.29
SYN1P17600 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.86■□□□□ 0.29
SYN1P17600 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 PRSS30P-206ENST00000641773 873 ntBASIC16.86■□□□□ 0.29
SYN1P17600 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SYN1P17600 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SYN1P17600 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYN1P17600 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SYN1P17600 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SYN1P17600 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.85■□□□□ 0.29
SYN1P17600 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.85■□□□□ 0.29
SYN1P17600 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.85■□□□□ 0.29
SYN1P17600 AC004899.1-201ENST00000424687 1714 ntBASIC16.85■□□□□ 0.29
SYN1P17600 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
SYN1P17600 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.85■□□□□ 0.29
SYN1P17600 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SYN1P17600 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.85■□□□□ 0.29
SYN1P17600 AL353637.1-201ENST00000451571 732 ntBASIC16.85■□□□□ 0.29
SYN1P17600 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.85■□□□□ 0.29
SYN1P17600 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.85■□□□□ 0.29
SYN1P17600 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.85■□□□□ 0.29
SYN1P17600 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.85■□□□□ 0.29
SYN1P17600 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.85■□□□□ 0.29
SYN1P17600 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.85■□□□□ 0.29
SYN1P17600 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYN1P17600 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 AP001094.4-201ENST00000579008 2176 ntBASIC16.84■□□□□ 0.29
SYN1P17600 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SYN1P17600 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms