Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 RNA5SP410-201ENST00000516285 106 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 RARRES2P8-201ENST00000566335 367 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 AC018845.2-201ENST00000568326 409 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 Z83851.2-201ENST00000609564 659 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 AL691432.3-201ENST00000621860 400 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 CYP4F24P-201ENST00000586049 1580 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 GRK6P1-201ENST00000400595 1711 ntBASIC13.36□□□□□ -0.27
HIST1H1DP16402 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H1DP16402 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1DP16402 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AC005912.2-201ENST00000619492 2400 ntBASIC13.35□□□□□ -0.27
HIST1H1DP16402 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AL359258.3-201ENST00000622910 2331 ntBASIC13.35□□□□□ -0.27
HIST1H1DP16402 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 FAM8A3P-201ENST00000427218 844 ntBASIC13.35□□□□□ -0.27
HIST1H1DP16402 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H1DP16402 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HIST1H1DP16402 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms