Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NCK1P16333 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.9□□□□□ -0.02
NCK1P16333 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.9□□□□□ -0.02
NCK1P16333 AC140658.5-201ENST00000438532 169 ntBASIC14.9□□□□□ -0.02
NCK1P16333 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.9□□□□□ -0.02
NCK1P16333 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.9□□□□□ -0.02
NCK1P16333 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.9□□□□□ -0.02
NCK1P16333 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NCK1P16333 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.9□□□□□ -0.02
NCK1P16333 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NCK1P16333 AC140479.7-201ENST00000636301 2332 ntBASIC14.9□□□□□ -0.02
NCK1P16333 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NCK1P16333 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NCK1P16333 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NCK1P16333 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 OR2I1P-209ENST00000641730 5365 ntBASIC14.89□□□□□ -0.03
NCK1P16333 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NCK1P16333 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 AC015656.1-201ENST00000624209 3578 ntBASIC14.89□□□□□ -0.03
NCK1P16333 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 CICP14-201ENST00000629111 2732 ntBASIC14.89□□□□□ -0.03
NCK1P16333 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 LINC01230-201ENST00000625222 3017 ntBASIC14.89□□□□□ -0.03
NCK1P16333 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 INTS4P1-203ENST00000641008 3683 ntBASIC14.89□□□□□ -0.03
NCK1P16333 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NCK1P16333 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 RHOQP3-201ENST00000437982 621 ntBASIC14.89□□□□□ -0.03
NCK1P16333 AC098831.1-202ENST00000438821 336 ntBASIC14.89□□□□□ -0.03
NCK1P16333 AC009947.1-201ENST00000444350 727 ntBASIC14.89□□□□□ -0.03
NCK1P16333 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.89□□□□□ -0.03
NCK1P16333 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 EMBP1-201ENST00000458200 901 ntBASIC14.89□□□□□ -0.03
NCK1P16333 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.89□□□□□ -0.03
NCK1P16333 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.89□□□□□ -0.03
NCK1P16333 AC096734.2-201ENST00000562054 433 ntBASIC14.89□□□□□ -0.03
NCK1P16333 AL138918.1-201ENST00000568306 659 ntBASIC14.89□□□□□ -0.03
NCK1P16333 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.89□□□□□ -0.03
NCK1P16333 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NCK1P16333 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.89□□□□□ -0.03
NCK1P16333 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NCK1P16333 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.89□□□□□ -0.03
NCK1P16333 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.88□□□□□ -0.03
NCK1P16333 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms