Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NKAIN1P1-201ENST00000435754 582 ntBASIC17.47■□□□□ 0.39
COL11A1P12107 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.47■□□□□ 0.39
COL11A1P12107 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
COL11A1P12107 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.47■□□□□ 0.39
COL11A1P12107 NDUFV2P1-201ENST00000596415 907 ntBASIC17.47■□□□□ 0.39
COL11A1P12107 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.47■□□□□ 0.39
COL11A1P12107 AL603764.1-201ENST00000636452 321 ntBASIC17.47■□□□□ 0.39
COL11A1P12107 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.47■□□□□ 0.39
COL11A1P12107 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 AL391005.1-201ENST00000623953 2435 ntBASIC17.47■□□□□ 0.39
COL11A1P12107 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 AC090616.6-203ENST00000579186 1945 ntBASIC17.47■□□□□ 0.39
COL11A1P12107 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COL11A1P12107 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COL11A1P12107 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COL11A1P12107 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.47■□□□□ 0.39
COL11A1P12107 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 CHMP4BP1-201ENST00000556017 588 ntBASIC17.47■□□□□ 0.39
COL11A1P12107 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COL11A1P12107 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.47■□□□□ 0.39
COL11A1P12107 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL11A1P12107 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.46■□□□□ 0.39
COL11A1P12107 AC138028.6-201ENST00000616106 1482 ntBASIC17.46■□□□□ 0.39
COL11A1P12107 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL11A1P12107 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.46■□□□□ 0.39
COL11A1P12107 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL11A1P12107 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.46■□□□□ 0.39
COL11A1P12107 AL359258.3-201ENST00000622910 2331 ntBASIC17.46■□□□□ 0.39
COL11A1P12107 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 TPM3P8-201ENST00000330554 643 ntBASIC17.46■□□□□ 0.39
COL11A1P12107 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COL11A1P12107 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.46■□□□□ 0.39
COL11A1P12107 POM121L10P-201ENST00000436994 1285 ntBASIC17.46■□□□□ 0.39
COL11A1P12107 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.46■□□□□ 0.39
COL11A1P12107 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.46■□□□□ 0.39
COL11A1P12107 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.46■□□□□ 0.39
COL11A1P12107 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.46■□□□□ 0.39
COL11A1P12107 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.46■□□□□ 0.39
COL11A1P12107 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL11A1P12107 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL11A1P12107 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
COL11A1P12107 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL11A1P12107 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL11A1P12107 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL11A1P12107 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
COL11A1P12107 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 AC015818.8-201ENST00000587907 1519 ntBASIC17.45■□□□□ 0.38
COL11A1P12107 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.45■□□□□ 0.38
COL11A1P12107 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
COL11A1P12107 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.45■□□□□ 0.38
COL11A1P12107 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.45■□□□□ 0.38
COL11A1P12107 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
COL11A1P12107 AC022217.1-201ENST00000521069 738 ntBASIC17.45■□□□□ 0.38
COL11A1P12107 AC105129.2-201ENST00000559536 390 ntBASIC17.45■□□□□ 0.38
COL11A1P12107 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.45■□□□□ 0.38
COL11A1P12107 MIR4683-201ENST00000579659 81 ntBASIC17.45■□□□□ 0.38
COL11A1P12107 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
COL11A1P12107 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.45■□□□□ 0.38
COL11A1P12107 AC138649.2-201ENST00000615886 705 ntBASIC17.45■□□□□ 0.38
COL11A1P12107 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COL11A1P12107 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.45■□□□□ 0.38
COL11A1P12107 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL11A1P12107 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.45■□□□□ 0.38
COL11A1P12107 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms