Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 KRT8P44-201ENST00000441609 1350 ntBASIC13.84□□□□□ -0.19
UBCP0CG48 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 AL671277.1-201ENST00000429656 993 ntBASIC13.84□□□□□ -0.19
UBCP0CG48 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.84□□□□□ -0.19
UBCP0CG48 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.84□□□□□ -0.19
UBCP0CG48 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 AC091812.2-201ENST00000619081 385 ntBASIC13.84□□□□□ -0.19
UBCP0CG48 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 AC009090.5-201ENST00000624886 2285 ntBASIC13.84□□□□□ -0.19
UBCP0CG48 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
UBCP0CG48 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.84□□□□□ -0.19
UBCP0CG48 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBCP0CG48 CYP4F24P-201ENST00000586049 1580 ntBASIC13.83□□□□□ -0.19
UBCP0CG48 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.83□□□□□ -0.19
UBCP0CG48 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
UBCP0CG48 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBCP0CG48 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBCP0CG48 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBCP0CG48 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBCP0CG48 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UBCP0CG48 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 MED15P5-201ENST00000423150 992 ntBASIC13.83□□□□□ -0.2
UBCP0CG48 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.83□□□□□ -0.2
UBCP0CG48 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 EEF1DP4-201ENST00000446006 880 ntBASIC13.83□□□□□ -0.2
UBCP0CG48 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.83□□□□□ -0.2
UBCP0CG48 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.83□□□□□ -0.2
UBCP0CG48 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.83□□□□□ -0.2
UBCP0CG48 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UBCP0CG48 AL136982.4-201ENST00000437689 1740 ntBASIC13.83□□□□□ -0.2
UBCP0CG48 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UBCP0CG48 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
UBCP0CG48 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
UBCP0CG48 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 IL9RP2-201ENST00000423948 1312 ntBASIC13.83□□□□□ -0.2
UBCP0CG48 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.83□□□□□ -0.2
UBCP0CG48 CICP24-201ENST00000605464 2705 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms