Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SFTPBP07988 KRT18P28-201ENST00000453838 1332 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SFTPBP07988 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SFTPBP07988 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.74□□□□□ -0.21
SFTPBP07988 AC004461.1-201ENST00000412461 403 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 AL671277.1-201ENST00000429656 993 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 ADH5P3-201ENST00000433842 1137 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 METTL21AP1-201ENST00000438852 635 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SFTPBP07988 AP000344.2-201ENST00000512987 629 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.74□□□□□ -0.21
SFTPBP07988 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.74□□□□□ -0.21
SFTPBP07988 MIR4321-201ENST00000592276 80 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SFTPBP07988 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.74□□□□□ -0.21
SFTPBP07988 AC022145.2-201ENST00000598203 171 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 AC027612.4-201ENST00000605371 583 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.74□□□□□ -0.21
SFTPBP07988 AL513210.1-201ENST00000629608 234 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SFTPBP07988 AC105339.1-204ENST00000636249 355 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 AL009178.2-201ENST00000597278 2719 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.74□□□□□ -0.21
SFTPBP07988 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 CICP13-201ENST00000422015 2789 ntBASIC13.73□□□□□ -0.21
SFTPBP07988 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.73□□□□□ -0.21
SFTPBP07988 PMS2P2-201ENST00000425039 1128 ntBASIC13.73□□□□□ -0.21
SFTPBP07988 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.73□□□□□ -0.21
SFTPBP07988 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.73□□□□□ -0.21
SFTPBP07988 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.73□□□□□ -0.21
SFTPBP07988 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms