Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.83■□□□□ 0.12
RETP07949 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.83■□□□□ 0.12
RETP07949 PAUPAR-201ENST00000630360 2965 ntBASIC15.83■□□□□ 0.12
RETP07949 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.83■□□□□ 0.12
RETP07949 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.83■□□□□ 0.12
RETP07949 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RETP07949 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.83■□□□□ 0.12
RETP07949 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.83■□□□□ 0.12
RETP07949 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RETP07949 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.83■□□□□ 0.12
RETP07949 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RETP07949 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RETP07949 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
RETP07949 AC005052.1-201ENST00000625181 2492 ntBASIC15.82■□□□□ 0.12
RETP07949 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.82■□□□□ 0.12
RETP07949 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.82■□□□□ 0.12
RETP07949 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RETP07949 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.82■□□□□ 0.12
RETP07949 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 BAATP1-201ENST00000412284 1225 ntBASIC15.82■□□□□ 0.12
RETP07949 AC026954.1-201ENST00000429771 1293 ntBASIC15.82■□□□□ 0.12
RETP07949 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.82■□□□□ 0.12
RETP07949 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
RETP07949 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.82■□□□□ 0.12
RETP07949 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.82■□□□□ 0.12
RETP07949 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.82■□□□□ 0.12
RETP07949 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.82■□□□□ 0.12
RETP07949 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.82■□□□□ 0.12
RETP07949 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.82■□□□□ 0.12
RETP07949 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 LINC01115-203ENST00000606068 577 ntBASIC15.82■□□□□ 0.12
RETP07949 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.82■□□□□ 0.12
RETP07949 AC015967.2-201ENST00000624092 234 ntBASIC15.82■□□□□ 0.12
RETP07949 AC006435.4-201ENST00000625037 234 ntBASIC15.82■□□□□ 0.12
RETP07949 AL356737.1-201ENST00000634391 234 ntBASIC15.82■□□□□ 0.12
RETP07949 AC244452.3-201ENST00000636814 210 ntBASIC15.82■□□□□ 0.12
RETP07949 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.82■□□□□ 0.12
RETP07949 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.82■□□□□ 0.12
RETP07949 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RETP07949 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RETP07949 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.82■□□□□ 0.12
RETP07949 AC103702.1-201ENST00000548801 2630 ntBASIC15.81■□□□□ 0.12
RETP07949 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RETP07949 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RETP07949 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RETP07949 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RETP07949 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RETP07949 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 AL596087.1-201ENST00000400979 1969 ntBASIC15.81■□□□□ 0.12
RETP07949 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RETP07949 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.81■□□□□ 0.12
RETP07949 FAM86HP-204ENST00000513466 959 ntBASIC15.81■□□□□ 0.12
RETP07949 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.81■□□□□ 0.12
RETP07949 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RETP07949 CYP4F24P-201ENST00000586049 1580 ntBASIC15.81■□□□□ 0.12
RETP07949 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.81■□□□□ 0.12
RETP07949 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.81■□□□□ 0.12
RETP07949 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RETP07949 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RETP07949 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RETP07949 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms