Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.18■□□□□ 0.82
COL5A2P05997 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AC098935.1-201ENST00000446057 611 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 RCC2P8-201ENST00000502779 1035 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.18■□□□□ 0.82
COL5A2P05997 AC009779.1-201ENST00000551138 283 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.18■□□□□ 0.82
COL5A2P05997 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AL136301.1-201ENST00000615830 422 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.17■□□□□ 0.82
COL5A2P05997 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.17■□□□□ 0.82
COL5A2P05997 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 AL596087.1-201ENST00000400979 1969 ntBASIC20.17■□□□□ 0.82
COL5A2P05997 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.17■□□□□ 0.82
COL5A2P05997 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.17■□□□□ 0.82
COL5A2P05997 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.17■□□□□ 0.82
COL5A2P05997 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.17■□□□□ 0.82
COL5A2P05997 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 AC073150.1-201ENST00000450406 1084 ntBASIC20.17■□□□□ 0.82
COL5A2P05997 NOC2LP1-201ENST00000450578 752 ntBASIC20.17■□□□□ 0.82
COL5A2P05997 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.17■□□□□ 0.82
COL5A2P05997 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.17■□□□□ 0.82
COL5A2P05997 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.17■□□□□ 0.82
COL5A2P05997 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.17■□□□□ 0.82
COL5A2P05997 AL132994.2-201ENST00000603120 687 ntBASIC20.17■□□□□ 0.82
COL5A2P05997 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.17■□□□□ 0.82
COL5A2P05997 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL5A2P05997 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL5A2P05997 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 AC009093.2-202ENST00000620513 2079 ntBASIC20.16■□□□□ 0.82
COL5A2P05997 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL5A2P05997 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL5A2P05997 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.16■□□□□ 0.82
COL5A2P05997 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.16■□□□□ 0.82
COL5A2P05997 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
COL5A2P05997 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL5A2P05997 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.16■□□□□ 0.82
COL5A2P05997 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
COL5A2P05997 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.16■□□□□ 0.82
COL5A2P05997 VDAC1P1-201ENST00000439229 848 ntBASIC20.16■□□□□ 0.82
COL5A2P05997 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.16■□□□□ 0.82
COL5A2P05997 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.16■□□□□ 0.82
COL5A2P05997 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
COL5A2P05997 AC002472.3-201ENST00000640124 621 ntBASIC20.16■□□□□ 0.82
COL5A2P05997 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL5A2P05997 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL5A2P05997 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
COL5A2P05997 SHC1P1-201ENST00000425230 1745 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 AL627389.1-201ENST00000413508 1182 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 RPSAP31-201ENST00000416648 895 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 AC026434.2-201ENST00000506094 1078 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms