Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 PGAM5P1-201ENST00000518923 814 ntBASIC14.2□□□□□ -0.14
HLA-DPB1P04440 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 WASH6P-202ENST00000359512 1437 ntBASIC14.2□□□□□ -0.14
HLA-DPB1P04440 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 FGD5P1-202ENST00000614866 2498 ntBASIC14.2□□□□□ -0.14
HLA-DPB1P04440 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 KRT8P44-201ENST00000441609 1350 ntBASIC14.2□□□□□ -0.14
HLA-DPB1P04440 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 PMS2P7-201ENST00000506558 1336 ntBASIC14.19□□□□□ -0.14
HLA-DPB1P04440 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.19□□□□□ -0.14
HLA-DPB1P04440 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 AC040169.1-201ENST00000565382 521 ntBASIC14.19□□□□□ -0.14
HLA-DPB1P04440 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 AC068137.2-201ENST00000605408 478 ntBASIC14.19□□□□□ -0.14
HLA-DPB1P04440 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DPB1P04440 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms