Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDGFAP04085 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PDGFAP04085 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PDGFAP04085 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.76□□□□□ -0.05
PDGFAP04085 TIMM17BP1-201ENST00000545713 516 ntBASIC14.76□□□□□ -0.05
PDGFAP04085 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.76□□□□□ -0.05
PDGFAP04085 AC015936.2-201ENST00000593177 259 ntBASIC14.76□□□□□ -0.05
PDGFAP04085 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.76□□□□□ -0.05
PDGFAP04085 BTNL10-201ENST00000595971 695 ntBASIC14.76□□□□□ -0.05
PDGFAP04085 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PDGFAP04085 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
PDGFAP04085 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.76□□□□□ -0.05
PDGFAP04085 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PDGFAP04085 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDGFAP04085 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.75□□□□□ -0.05
PDGFAP04085 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.75□□□□□ -0.05
PDGFAP04085 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFAP04085 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.75□□□□□ -0.05
PDGFAP04085 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.75□□□□□ -0.05
PDGFAP04085 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 CYP4F24P-201ENST00000586049 1580 ntBASIC14.75□□□□□ -0.05
PDGFAP04085 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.75□□□□□ -0.05
PDGFAP04085 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFAP04085 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.75□□□□□ -0.05
PDGFAP04085 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms