Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC011477.6-201ENST00000604980 1927 ntBASIC17.64■□□□□ 0.42
ALDH1A1P00352 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
ALDH1A1P00352 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 AC005915.1-201ENST00000624912 2018 ntBASIC17.64■□□□□ 0.41
ALDH1A1P00352 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 PDIA3P2-201ENST00000428073 158 ntBASIC17.64■□□□□ 0.41
ALDH1A1P00352 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 AC090857.1-201ENST00000527400 390 ntBASIC17.64■□□□□ 0.41
ALDH1A1P00352 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 AC242376.1-201ENST00000559033 726 ntBASIC17.64■□□□□ 0.41
ALDH1A1P00352 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALDH1A1P00352 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALDH1A1P00352 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC007787.1-201ENST00000588095 1583 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 RN7SKP214-201ENST00000364208 315 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 EIF3FP3-201ENST00000434851 1086 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC116345.2-201ENST00000512837 523 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC090164.2-201ENST00000611487 516 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 NAP1L6-202ENST00000641404 1222 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.63■□□□□ 0.41
ALDH1A1P00352 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALDH1A1P00352 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALDH1A1P00352 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 ISCA2P1-201ENST00000425548 448 ntBASIC17.62■□□□□ 0.41
ALDH1A1P00352 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 AP001065.2-201ENST00000617205 644 ntBASIC17.62■□□□□ 0.41
ALDH1A1P00352 AL805961.1-201ENST00000642026 753 ntBASIC17.62■□□□□ 0.41
ALDH1A1P00352 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms