Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.31■□□□□ 0.84
LTN1O94822 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.31■□□□□ 0.84
LTN1O94822 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 AC010491.1-201ENST00000563101 2797 ntBASIC20.31■□□□□ 0.84
LTN1O94822 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LTN1O94822 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.31■□□□□ 0.84
LTN1O94822 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.31■□□□□ 0.84
LTN1O94822 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.31■□□□□ 0.84
LTN1O94822 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.31■□□□□ 0.84
LTN1O94822 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.31■□□□□ 0.84
LTN1O94822 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.31■□□□□ 0.84
LTN1O94822 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.31■□□□□ 0.84
LTN1O94822 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
LTN1O94822 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTN1O94822 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.31■□□□□ 0.84
LTN1O94822 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.3■□□□□ 0.84
LTN1O94822 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.3■□□□□ 0.84
LTN1O94822 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.3■□□□□ 0.84
LTN1O94822 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 PDIA3P2-201ENST00000428073 158 ntBASIC20.3■□□□□ 0.84
LTN1O94822 RPS2P36-201ENST00000456516 831 ntBASIC20.3■□□□□ 0.84
LTN1O94822 TMEM198B-204ENST00000484016 896 ntBASIC20.3■□□□□ 0.84
LTN1O94822 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.3■□□□□ 0.84
LTN1O94822 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.3■□□□□ 0.84
LTN1O94822 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTN1O94822 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LTN1O94822 AC009093.2-202ENST00000620513 2079 ntBASIC20.29■□□□□ 0.84
LTN1O94822 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LTN1O94822 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.29■□□□□ 0.84
LTN1O94822 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.29■□□□□ 0.84
LTN1O94822 AC116345.2-201ENST00000512837 523 ntBASIC20.29■□□□□ 0.84
LTN1O94822 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LTN1O94822 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.29■□□□□ 0.84
LTN1O94822 AC068587.8-201ENST00000641239 219 ntBASIC20.29■□□□□ 0.84
LTN1O94822 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 AC011840.2-201ENST00000563063 1520 ntBASIC20.29■□□□□ 0.84
LTN1O94822 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms