Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC136944.6-201ENST00000634818 245 ntBASIC13.71□□□□□ -0.21
UPK1BO75841 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1BO75841 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1BO75841 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1BO75841 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UPK1BO75841 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK1BO75841 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.71□□□□□ -0.22
UPK1BO75841 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1BO75841 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.7□□□□□ -0.22
UPK1BO75841 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK1BO75841 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK1BO75841 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 AC012618.2-201ENST00000428058 849 ntBASIC13.7□□□□□ -0.22
UPK1BO75841 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 AC087163.2-201ENST00000457299 853 ntBASIC13.7□□□□□ -0.22
UPK1BO75841 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK1BO75841 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.7□□□□□ -0.22
UPK1BO75841 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK1BO75841 AC011840.4-201ENST00000578471 627 ntBASIC13.7□□□□□ -0.22
UPK1BO75841 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 AL023973.1-201ENST00000624619 620 ntBASIC13.7□□□□□ -0.22
UPK1BO75841 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 SIGLEC16-201ENST00000599858 1437 ntBASIC13.7□□□□□ -0.22
UPK1BO75841 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UPK1BO75841 CES1P1-201ENST00000421606 1704 ntBASIC13.7□□□□□ -0.22
UPK1BO75841 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1BO75841 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1BO75841 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UPK1BO75841 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 AC138969.2-201ENST00000532739 9932 ntBASIC13.69□□□□□ -0.22
UPK1BO75841 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.69□□□□□ -0.22
UPK1BO75841 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK1BO75841 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.69□□□□□ -0.22
UPK1BO75841 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.69□□□□□ -0.22
UPK1BO75841 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms