Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
EXTL3O43909 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.99■□□□□ 0.31
EXTL3O43909 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.99■□□□□ 0.31
EXTL3O43909 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.99■□□□□ 0.31
EXTL3O43909 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EXTL3O43909 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
EXTL3O43909 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.98■□□□□ 0.31
EXTL3O43909 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 API5-211ENST00000534695 560 ntTSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
EXTL3O43909 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.98■□□□□ 0.31
EXTL3O43909 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
EXTL3O43909 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EXTL3O43909 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
EXTL3O43909 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EXTL3O43909 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EXTL3O43909 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EXTL3O43909 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EXTL3O43909 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EXTL3O43909 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 RPL5P21-201ENST00000404620 815 ntBASIC16.97■□□□□ 0.31
EXTL3O43909 AC087499.6-201ENST00000411576 835 ntBASIC16.97■□□□□ 0.31
EXTL3O43909 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 FAM86LP-201ENST00000478302 853 ntBASIC16.97■□□□□ 0.31
EXTL3O43909 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.97■□□□□ 0.31
EXTL3O43909 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.97■□□□□ 0.31
EXTL3O43909 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.97■□□□□ 0.31
EXTL3O43909 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
EXTL3O43909 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EXTL3O43909 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.97■□□□□ 0.31
EXTL3O43909 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.97■□□□□ 0.31
EXTL3O43909 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms