Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.62■□□□□ 0.41
ACTN4O43707 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.62■□□□□ 0.41
ACTN4O43707 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ACTN4O43707 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.62■□□□□ 0.41
ACTN4O43707 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.62■□□□□ 0.41
ACTN4O43707 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ACTN4O43707 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 CNN2P11-201ENST00000429351 262 ntBASIC17.61■□□□□ 0.41
ACTN4O43707 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.61■□□□□ 0.41
ACTN4O43707 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.61■□□□□ 0.41
ACTN4O43707 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
ACTN4O43707 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ACTN4O43707 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ACTN4O43707 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ACTN4O43707 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.6■□□□□ 0.41
ACTN4O43707 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.6■□□□□ 0.41
ACTN4O43707 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.6■□□□□ 0.41
ACTN4O43707 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.6■□□□□ 0.41
ACTN4O43707 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.6■□□□□ 0.41
ACTN4O43707 AL589739.1-201ENST00000607720 493 ntBASIC17.6■□□□□ 0.41
ACTN4O43707 AC134684.3-201ENST00000641758 218 ntBASIC17.6■□□□□ 0.41
ACTN4O43707 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ACTN4O43707 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.6■□□□□ 0.41
ACTN4O43707 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
ACTN4O43707 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ACTN4O43707 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ACTN4O43707 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ACTN4O43707 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms