Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNQ3O43525 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNQ3O43525 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNQ3O43525 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNQ3O43525 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
KCNQ3O43525 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KCNQ3O43525 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
KCNQ3O43525 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNQ3O43525 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 BRWD1P1-201ENST00000401091 371 ntBASIC19.91■□□□□ 0.78
KCNQ3O43525 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KCNQ3O43525 KRT18P25-201ENST00000508931 1278 ntBASIC19.91■□□□□ 0.78
KCNQ3O43525 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNQ3O43525 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNQ3O43525 DUX4L45-201ENST00000566406 1057 ntBASIC19.91■□□□□ 0.78
KCNQ3O43525 ECM1P1-201ENST00000604092 1279 ntBASIC19.91■□□□□ 0.78
KCNQ3O43525 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNQ3O43525 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNQ3O43525 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KCNQ3O43525 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 ACTBP8-201ENST00000403258 1108 ntBASIC19.9■□□□□ 0.78
KCNQ3O43525 MIR1202-201ENST00000408529 83 ntBASIC19.9■□□□□ 0.78
KCNQ3O43525 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KCNQ3O43525 YBX1P6-201ENST00000442962 1002 ntBASIC19.9■□□□□ 0.78
KCNQ3O43525 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNQ3O43525 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNQ3O43525 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNQ3O43525 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNQ3O43525 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNQ3O43525 RN7SL560P-201ENST00000577943 264 ntBASIC19.9■□□□□ 0.78
KCNQ3O43525 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.9■□□□□ 0.78
KCNQ3O43525 MIR6787-201ENST00000616675 61 ntBASIC19.9■□□□□ 0.78
KCNQ3O43525 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNQ3O43525 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNQ3O43525 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNQ3O43525 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 AC026691.1-201ENST00000602502 2017 ntBASIC19.9■□□□□ 0.78
KCNQ3O43525 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KCNQ3O43525 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
KCNQ3O43525 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNQ3O43525 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KCNQ3O43525 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 MIR326-201ENST00000362220 95 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.89■□□□□ 0.77
KCNQ3O43525 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms