Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXA2O43364 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HOXA2O43364 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXA2O43364 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXA2O43364 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXA2O43364 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HOXA2O43364 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXA2O43364 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXA2O43364 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXA2O43364 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXA2O43364 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXA2O43364 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
HOXA2O43364 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 MIR1202-201ENST00000408529 83 ntBASIC16.66■□□□□ 0.26
HOXA2O43364 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXA2O43364 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXA2O43364 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXA2O43364 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXA2O43364 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXA2O43364 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXA2O43364 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXA2O43364 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXA2O43364 PRSS30P-206ENST00000641773 873 ntBASIC16.66■□□□□ 0.26
HOXA2O43364 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HOXA2O43364 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXA2O43364 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXA2O43364 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA2O43364 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
HOXA2O43364 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 GOLGA2P4-201ENST00000441462 777 ntBASIC16.65■□□□□ 0.26
HOXA2O43364 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA2O43364 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA2O43364 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXA2O43364 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 MIR3615-201ENST00000581999 87 ntBASIC16.65■□□□□ 0.26
HOXA2O43364 EEF1DP1-201ENST00000585891 896 ntBASIC16.65■□□□□ 0.26
HOXA2O43364 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HOXA2O43364 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 LRRC59-203ENST00000576448 1531 ntBASIC16.65■□□□□ 0.26
HOXA2O43364 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXA2O43364 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXA2O43364 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXA2O43364 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA2O43364 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXA2O43364 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXA2O43364 PCDHA12-202ENST00000613593 2588 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms