Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.68■□□□□ 0.1
PHGDHO43175 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.68■□□□□ 0.1
PHGDHO43175 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.68■□□□□ 0.1
PHGDHO43175 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.68■□□□□ 0.1
PHGDHO43175 AL671883.3-201ENST00000603274 991 ntBASIC15.68■□□□□ 0.1
PHGDHO43175 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 AC105339.1-204ENST00000636249 355 ntBASIC15.68■□□□□ 0.1
PHGDHO43175 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PHGDHO43175 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.68■□□□□ 0.1
PHGDHO43175 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 AL607033.1-201ENST00000623900 1599 ntBASIC15.67■□□□□ 0.1
PHGDHO43175 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.67■□□□□ 0.1
PHGDHO43175 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 AC005237.2-201ENST00000434368 219 ntBASIC15.67■□□□□ 0.1
PHGDHO43175 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.67■□□□□ 0.1
PHGDHO43175 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.67■□□□□ 0.1
PHGDHO43175 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.67■□□□□ 0.1
PHGDHO43175 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.67■□□□□ 0.1
PHGDHO43175 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.67■□□□□ 0.1
PHGDHO43175 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.67■□□□□ 0.1
PHGDHO43175 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PHGDHO43175 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHGDHO43175 AC106881.1-201ENST00000605849 3329 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 AC023024.2-201ENST00000623561 1993 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms