Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLOCKO15516 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLOCKO15516 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLOCKO15516 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.02■□□□□ -0
CLOCKO15516 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CLOCKO15516 DNAJB3-201ENST00000446806 729 ntBASIC15.02■□□□□ -0
CLOCKO15516 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.02■□□□□ -0
CLOCKO15516 AC108073.2-201ENST00000464002 357 ntBASIC15.02■□□□□ -0
CLOCKO15516 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.02■□□□□ -0
CLOCKO15516 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.02■□□□□ -0
CLOCKO15516 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.02■□□□□ -0
CLOCKO15516 AC021097.1-201ENST00000607902 574 ntBASIC15.02■□□□□ -0
CLOCKO15516 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.02■□□□□ -0
CLOCKO15516 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLOCKO15516 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.02□□□□□ -0.01
CLOCKO15516 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.02□□□□□ -0.01
CLOCKO15516 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CLOCKO15516 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.02□□□□□ -0.01
CLOCKO15516 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLOCKO15516 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.02□□□□□ -0.01
CLOCKO15516 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLOCKO15516 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLOCKO15516 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.01□□□□□ -0.01
CLOCKO15516 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLOCKO15516 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLOCKO15516 YBX2P1-201ENST00000394192 760 ntBASIC15.01□□□□□ -0.01
CLOCKO15516 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 UPF3AP3-201ENST00000420996 769 ntBASIC15.01□□□□□ -0.01
CLOCKO15516 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.01□□□□□ -0.01
CLOCKO15516 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.01□□□□□ -0.01
CLOCKO15516 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.01□□□□□ -0.01
CLOCKO15516 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.01□□□□□ -0.01
CLOCKO15516 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.01□□□□□ -0.01
CLOCKO15516 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.01□□□□□ -0.01
CLOCKO15516 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.01□□□□□ -0.01
CLOCKO15516 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.01□□□□□ -0.01
CLOCKO15516 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.01□□□□□ -0.01
CLOCKO15516 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLOCKO15516 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLOCKO15516 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLOCKO15516 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms