Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 BRI3P1-201ENST00000440440 378 ntBASIC24.54■■□□□ 1.52
CHD1O14646 FTLP5-201ENST00000586853 534 ntBASIC24.54■■□□□ 1.52
CHD1O14646 NAMA-206ENST00000605377 509 ntTSL 5 BASIC24.54■■□□□ 1.52
CHD1O14646 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC24.54■■□□□ 1.52
CHD1O14646 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC24.54■■□□□ 1.52
CHD1O14646 DDX5-235ENST00000630471 473 ntTSL 4 BASIC24.54■■□□□ 1.52
CHD1O14646 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CHD1O14646 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC24.54■■□□□ 1.52
CHD1O14646 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 AC018629.1-201ENST00000623381 1736 ntBASIC24.54■■□□□ 1.52
CHD1O14646 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC24.53■■□□□ 1.52
CHD1O14646 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CHD1O14646 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC24.53■■□□□ 1.52
CHD1O14646 AL157407.1-201ENST00000435784 904 ntBASIC24.53■■□□□ 1.52
CHD1O14646 CCNC-217ENST00000523985 958 ntTSL 2 BASIC24.53■■□□□ 1.52
CHD1O14646 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC24.53■■□□□ 1.52
CHD1O14646 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CHD1O14646 PTPN20CP-201ENST00000614090 920 ntBASIC24.53■■□□□ 1.52
CHD1O14646 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CHD1O14646 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
CHD1O14646 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CHD1O14646 LINC01815-202ENST00000641468 1409 ntBASIC24.53■■□□□ 1.52
CHD1O14646 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC24.53■■□□□ 1.52
CHD1O14646 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD1O14646 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC24.53■■□□□ 1.52
CHD1O14646 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD1O14646 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CHD1O14646 AC084752.1-201ENST00000509766 622 ntBASIC24.52■■□□□ 1.52
CHD1O14646 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD1O14646 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD1O14646 AC012073.1-201ENST00000606114 1108 ntBASIC24.52■■□□□ 1.52
CHD1O14646 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD1O14646 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CHD1O14646 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC24.52■■□□□ 1.52
CHD1O14646 STK26-204ENST00000481105 1835 ntTSL 2 BASIC24.52■■□□□ 1.52
CHD1O14646 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC24.52■■□□□ 1.52
CHD1O14646 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC24.52■■□□□ 1.52
CHD1O14646 GCSHP3-201ENST00000431120 391 ntBASIC24.52■■□□□ 1.52
CHD1O14646 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC24.52■■□□□ 1.52
CHD1O14646 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC24.52■■□□□ 1.52
CHD1O14646 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC24.52■■□□□ 1.52
CHD1O14646 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC24.52■■□□□ 1.52
CHD1O14646 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CHD1O14646 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHD1O14646 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC24.52■■□□□ 1.52
CHD1O14646 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC24.51■■□□□ 1.51
CHD1O14646 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC24.51■■□□□ 1.51
CHD1O14646 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC24.51■■□□□ 1.51
CHD1O14646 AC006449.6-201ENST00000612330 2296 ntBASIC24.51■■□□□ 1.51
CHD1O14646 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CHD1O14646 Z69890.1-201ENST00000382990 339 ntBASIC24.51■■□□□ 1.51
CHD1O14646 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC24.51■■□□□ 1.51
CHD1O14646 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC24.51■■□□□ 1.51
CHD1O14646 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC24.51■■□□□ 1.51
CHD1O14646 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
CHD1O14646 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC24.51■■□□□ 1.51
CHD1O14646 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHD1O14646 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CHD1O14646 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHD1O14646 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHD1O14646 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHD1O14646 AL645933.1-201ENST00000440087 609 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms