Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLIC1O00299 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 FDX1P1-201ENST00000449115 551 ntBASIC14.85□□□□□ -0.03
CLIC1O00299 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.85□□□□□ -0.03
CLIC1O00299 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CLIC1O00299 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.85□□□□□ -0.03
CLIC1O00299 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.85□□□□□ -0.03
CLIC1O00299 AC120114.3-201ENST00000611923 658 ntBASIC14.85□□□□□ -0.03
CLIC1O00299 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLIC1O00299 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLIC1O00299 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLIC1O00299 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CLIC1O00299 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLIC1O00299 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 UXT-AS1-201ENST00000590504 1525 ntBASIC14.84□□□□□ -0.03
CLIC1O00299 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CLIC1O00299 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.84□□□□□ -0.03
CLIC1O00299 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 AL607033.1-201ENST00000623900 1599 ntBASIC14.84□□□□□ -0.03
CLIC1O00299 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLIC1O00299 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLIC1O00299 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.84□□□□□ -0.03
CLIC1O00299 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLIC1O00299 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CLIC1O00299 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CLIC1O00299 OR2I1P-210ENST00000642037 4691 ntBASIC14.83□□□□□ -0.03
CLIC1O00299 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLIC1O00299 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.83□□□□□ -0.03
CLIC1O00299 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms