Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 AC068587.6-202ENST00000641839 5619 ntBASIC17.64■□□□□ 0.41
DDX39AO00148 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.64■□□□□ 0.41
DDX39AO00148 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDX39AO00148 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX39AO00148 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX39AO00148 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDX39AO00148 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 VDAC1P7-201ENST00000462417 847 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 AC011495.1-201ENST00000498085 584 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX39AO00148 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 CR383656.12-201ENST00000549567 513 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 AL359711.2-201ENST00000563105 872 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX39AO00148 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 AL049840.4-201ENST00000602422 811 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 AL033527.5-201ENST00000641382 801 ntBASIC17.63■□□□□ 0.41
DDX39AO00148 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
DDX39AO00148 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX39AO00148 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX39AO00148 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX39AO00148 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX39AO00148 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX39AO00148 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 GIMAP3P-201ENST00000495150 836 ntBASIC17.62■□□□□ 0.41
DDX39AO00148 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX39AO00148 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX39AO00148 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX39AO00148 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DDX39AO00148 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 AL365203.3-201ENST00000609742 2057 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms