Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC104596.2-201ENST00000512793 793 ntBASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC074044.1-201ENST00000609673 707 ntBASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMX2-CTNND1H3BSU7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ACA64.2-201ENST00000459014 129 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 KRT17P8-201ENST00000540749 863 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC123567.1-201ENST00000548294 1261 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC092337.1-201ENST00000568699 1129 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC132938.2-201ENST00000579188 680 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 U82695.1-201ENST00000635752 1889 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AL591163.1-201ENST00000641757 987 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 AL109936.8-201ENST00000641772 604 ntBASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms