Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 Z69890.1-201ENST00000382990 339 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC026320.2-201ENST00000434379 478 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 FAM58BP-201ENST00000439056 645 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC004066.1-201ENST00000502488 802 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC105137.3-201ENST00000617588 984 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AL603764.1-201ENST00000636452 321 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 AC060834.1-201ENST00000443027 2032 ntBASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 PSMD4P1-201ENST00000433951 1109 ntBASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AL118516.1-201ENST00000564152 670 ntBASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 MIR3677-201ENST00000578964 60 ntBASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 MIR4683-201ENST00000579659 81 ntBASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AL358472.3-201ENST00000608147 415 ntBASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 CLUHP2-201ENST00000426660 1303 ntBASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM88BA6NKF7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 DDX39AP1-201ENST00000445147 1181 ntBASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 LYPLA2P1-203ENST00000447689 696 ntBASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AC024293.1-201ENST00000467930 498 ntBASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AL109837.1-201ENST00000603272 613 ntBASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AC244250.3-201ENST00000620749 366 ntBASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TMEM88BA6NKF7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms