Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 AC005229.1-201ENST00000392885 409 ntBASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 AP001063.1-201ENST00000568332 529 ntBASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 CLUHP6-201ENST00000580789 941 ntBASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3FA6NER0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ANKRD19P-201ENST00000338192 862 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AC093433.1-201ENST00000458048 571 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AP001889.1-201ENST00000525414 633 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AC093813.1-201ENST00000605066 256 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms