Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RCCD1A6NED2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.71■□□□□ 0.26
RCCD1A6NED2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.7■□□□□ 0.26
RCCD1A6NED2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 HIST3H2BA-201ENST00000436555 524 ntBASIC16.7■□□□□ 0.26
RCCD1A6NED2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 BANF1P1-201ENST00000553684 263 ntBASIC16.7■□□□□ 0.26
RCCD1A6NED2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 AP000845.1-201ENST00000581677 2131 ntBASIC16.7■□□□□ 0.26
RCCD1A6NED2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RCCD1A6NED2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCCD1A6NED2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AC023274.1-201ENST00000418278 595 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 KRT18P3-201ENST00000451602 1288 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 RNA5SP416-201ENST00000516838 111 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AC084121.4-201ENST00000641598 221 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 AF228730.8-201ENST00000642140 221 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms