Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 CICP11-201ENST00000434745 2827 ntBASIC17.93■□□□□ 0.46
CLIC4Q9Y696 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AL139400.1-201ENST00000366220 510 ntBASIC17.93■□□□□ 0.46
CLIC4Q9Y696 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 RPL37AP1-201ENST00000412502 279 ntBASIC17.93■□□□□ 0.46
CLIC4Q9Y696 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 KRT18P64-201ENST00000434946 1219 ntBASIC17.93■□□□□ 0.46
CLIC4Q9Y696 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AL512356.2-201ENST00000546955 174 ntBASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AC084364.1-201ENST00000551967 1556 ntBASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AC069262.1-201ENST00000539058 672 ntBASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 LINC00628-201ENST00000628516 1289 ntBASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIC4Q9Y696 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms