Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 AC126915.1-201ENST00000522847 1038 ntBASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC2Q9Y5Z7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 NUS1P3-201ENST00000423502 862 ntBASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 NDUFV2P1-201ENST00000596415 907 ntBASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 AC025181.2-201ENST00000606994 802 ntBASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC2Q9Y5Z7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 NKILA-202ENST00000614771 2598 ntBASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 AC079178.1-201ENST00000420915 656 ntBASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 MIR3619-201ENST00000579667 83 ntBASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 AC138627.1-207ENST00000641560 1006 ntBASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 LRRC59-203ENST00000576448 1531 ntBASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HCFC2Q9Y5Z7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms