Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 AL157414.3-201ENST00000624276 1954 ntBASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 AC002472.3-201ENST00000640124 621 ntBASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 INE2-201ENST00000630399 1874 ntBASIC23.13■■□□□ 1.29
CDC42BPBQ9Y5S2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 AC008267.1-201ENST00000474858 1069 ntBASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 AC138696.2-201ENST00000607376 223 ntBASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 Z98259.2-201ENST00000641583 609 ntBASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42BPBQ9Y5S2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 VDAC1P1-201ENST00000439229 848 ntBASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 IQSEC3P1-201ENST00000538799 536 ntBASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 AL603832.2-201ENST00000566195 2125 ntBASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 AC011840.2-201ENST00000563063 1520 ntBASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 AC012618.1-201ENST00000461223 412 ntBASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
CDC42BPBQ9Y5S2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 SHC1P1-201ENST00000425230 1745 ntBASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 RPL5P21-201ENST00000404620 815 ntBASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 AC011742.3-201ENST00000439053 820 ntBASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPBQ9Y5S2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms