Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 GK-202ENST00000378941 458 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AL589739.1-201ENST00000607720 493 ntBASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 TEX28P1-201ENST00000613479 1221 ntBASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 TEX28P2-201ENST00000617764 1221 ntBASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AC023157.3-201ENST00000619086 2088 ntBASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 AC006449.6-201ENST00000612330 2296 ntBASIC14.94□□□□□ -0.02
PCDHGB6Q9Y5F9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 AL592424.1-201ENST00000563624 1536 ntBASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 CRB3P1-201ENST00000449338 276 ntBASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB6Q9Y5F9 AC026979.3-201ENST00000607315 403 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms