Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AL139010.1-201ENST00000454878 894 ntBASIC14.8□□□□□ -0.04
IFT52Q9Y366 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 MTDHP5-201ENST00000598980 586 ntBASIC14.8□□□□□ -0.04
IFT52Q9Y366 AC026979.3-201ENST00000607315 403 ntBASIC14.8□□□□□ -0.04
IFT52Q9Y366 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 BNIP3P1-202ENST00000550043 1585 ntBASIC14.8□□□□□ -0.04
IFT52Q9Y366 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 AC087481.3-201ENST00000602886 1894 ntBASIC14.8□□□□□ -0.04
IFT52Q9Y366 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 AC126755.1-201ENST00000525846 6405 ntBASIC14.8□□□□□ -0.04
IFT52Q9Y366 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFT52Q9Y366 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IFT52Q9Y366 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 MIR940-201ENST00000401276 94 ntBASIC14.79□□□□□ -0.04
IFT52Q9Y366 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC004832.2-201ENST00000426397 482 ntBASIC14.79□□□□□ -0.04
IFT52Q9Y366 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.79□□□□□ -0.04
IFT52Q9Y366 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC079140.1-201ENST00000508039 487 ntBASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 LINC01225-203ENST00000563550 1244 ntBASIC14.79□□□□□ -0.04
IFT52Q9Y366 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFT52Q9Y366 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFT52Q9Y366 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 REXO1L1P-202ENST00000608646 1974 ntBASIC14.78□□□□□ -0.04
IFT52Q9Y366 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.78□□□□□ -0.04
IFT52Q9Y366 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFT52Q9Y366 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms