Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NINLQ9Y2I6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.27■■□□□ 1
NINLQ9Y2I6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 AC007551.1-201ENST00000457394 519 ntBASIC21.27■■□□□ 1
NINLQ9Y2I6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.27■■□□□ 1
NINLQ9Y2I6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.27■■□□□ 1
NINLQ9Y2I6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NINLQ9Y2I6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 RHOXF1P1-202ENST00000635473 501 ntBASIC21.27■■□□□ 1
NINLQ9Y2I6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NINLQ9Y2I6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.27■■□□□ 1
NINLQ9Y2I6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.27■■□□□ 1
NINLQ9Y2I6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NINLQ9Y2I6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NINLQ9Y2I6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 AL355994.2-201ENST00000447882 704 ntBASIC21.26■□□□□ 0.99
NINLQ9Y2I6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 RNA5SP412-201ENST00000516234 123 ntBASIC21.26■□□□□ 0.99
NINLQ9Y2I6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NINLQ9Y2I6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 TUBB1P2-201ENST00000422712 1306 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 TUBB1P1-201ENST00000503144 1300 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 C2orf27AP3-201ENST00000434123 579 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 AC244669.2-201ENST00000612320 853 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 AL354718.3-201ENST00000616414 581 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CR382287.1-201ENST00000623954 586 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 PCDH8P1-201ENST00000428983 2773 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 AL365203.3-201ENST00000609742 2057 ntBASIC21.25■□□□□ 0.99
NINLQ9Y2I6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NINLQ9Y2I6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
NINLQ9Y2I6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.24■□□□□ 0.99
NINLQ9Y2I6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NINLQ9Y2I6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
NINLQ9Y2I6 KLF2P2-201ENST00000416807 1039 ntBASIC21.24■□□□□ 0.99
NINLQ9Y2I6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.24■□□□□ 0.99
NINLQ9Y2I6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NINLQ9Y2I6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms