Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS9D1Q9Y2B5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS9D1Q9Y2B5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AC136621.1-201ENST00000624017 2304 ntBASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 TSEN15P1-201ENST00000423257 515 ntBASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 HLA-V-204ENST00000476601 1289 ntBASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AC027612.4-201ENST00000605371 583 ntBASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS9D1Q9Y2B5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AL078595.1-201ENST00000404458 226 ntBASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AC108673.2-201ENST00000608909 565 ntBASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS9D1Q9Y2B5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms