Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AP005482.1-201ENST00000563722 1273 ntBASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 MIR6775-201ENST00000617557 69 ntBASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DENND2AQ9ULE3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 BAATP1-201ENST00000412284 1225 ntBASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 AC093433.1-201ENST00000458048 571 ntBASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 AC119751.2-201ENST00000504529 210 ntBASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 SNX29P1-201ENST00000548357 1007 ntBASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DENND2AQ9ULE3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 MIR4259-201ENST00000584466 101 ntBASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms