Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CNOT11Q9UKZ1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 U82695.1-201ENST00000635752 1889 ntBASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 METTL21AP1-201ENST00000438852 635 ntBASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AL138918.1-201ENST00000568306 659 ntBASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AC027307.2-201ENST00000591252 911 ntBASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AP003680.1-201ENST00000598970 3660 ntBASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 AJ011931.1-201ENST00000618749 2492 ntBASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT11Q9UKZ1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AC041040.2-201ENST00000622926 2899 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AL139400.1-201ENST00000366220 510 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 TSEN15P1-201ENST00000423257 515 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 IGHV3-62-201ENST00000520057 340 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms