Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 BOLA2P3-201ENST00000404566 256 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 HLA-V-201ENST00000429037 534 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 RN7SL837P-201ENST00000463010 287 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 ELK1P1-201ENST00000485699 580 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 HILS1-202ENST00000545329 423 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 AC004790.1-201ENST00000612686 536 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 AC132872.4-202ENST00000622924 2756 ntBASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXD3Q9UJU5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 Z97205.2-201ENST00000564697 1639 ntBASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXD3Q9UJU5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms