Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC007389.4-201ENST00000454674 793 ntBASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 POU5F1P6-201ENST00000466990 990 ntBASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 PRAL-201ENST00000624952 3286 ntBASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 AC004987.2-201ENST00000395959 1148 ntBASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 AC104596.2-201ENST00000512793 793 ntBASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 AC092552.1-201ENST00000547243 906 ntBASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 AC013268.4-201ENST00000637413 2228 ntBASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HDAC6Q9UBN7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 FER1L4-210ENST00000615531 5998 ntBASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 AL592424.1-201ENST00000563624 1536 ntBASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HDAC6Q9UBN7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 MIR4259-201ENST00000584466 101 ntBASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.76■□□□□ 0.43
HDAC6Q9UBN7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms