Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AL133267.1-201ENST00000398220 340 ntBASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AC134915.1-201ENST00000426461 574 ntBASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AC244107.1-201ENST00000442033 332 ntBASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AL359711.2-201ENST00000563105 872 ntBASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE7Q9UBL6 INTS4P2-202ENST00000614726 2019 ntBASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 AC010491.1-201ENST00000563101 2797 ntBASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 AL162726.2-201ENST00000438986 1017 ntBASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 CU634019.7-201ENST00000624153 1185 ntBASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 FP236241.2-201ENST00000624906 1185 ntBASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE7Q9UBL6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CPNE7Q9UBL6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms