Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 AC243562.2-201ENST00000561247 970 ntBASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AC092127.1-201ENST00000567093 3455 ntBASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AC254562.1-201ENST00000417586 456 ntBASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 TIMM8BP1-201ENST00000452384 211 ntBASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LIN7CQ9NUP9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 LINC02228-204ENST00000642115 2962 ntBASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms