Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AL390755.1-201ENST00000623716 2027 ntBASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 FGD5P1-202ENST00000614866 2498 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CYP4F24P-201ENST00000586049 1580 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 AC104109.2-201ENST00000602919 1418 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 AC023908.3-201ENST00000564211 3047 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 AC232323.1-201ENST00000540724 2099 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 REXO1L5P-201ENST00000622260 2098 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 ZBED1P1-201ENST00000502364 1930 ntBASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CDC42SE2Q9NRR3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms