Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX8Q9HC52 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX8Q9HC52 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX8Q9HC52 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX8Q9HC52 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX8Q9HC52 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX8Q9HC52 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.58■□□□□ 0.4
CBX8Q9HC52 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 CICP11-201ENST00000434745 2827 ntBASIC17.57■□□□□ 0.4
CBX8Q9HC52 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 WASH3P-207ENST00000560956 1394 ntBASIC17.57■□□□□ 0.4
CBX8Q9HC52 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 FO538757.1-201ENST00000623083 1397 ntBASIC17.57■□□□□ 0.4
CBX8Q9HC52 LINC01230-201ENST00000625222 3017 ntBASIC17.57■□□□□ 0.4
CBX8Q9HC52 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX8Q9HC52 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CBX8Q9HC52 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 BCAR1-209ENST00000546196 1340 ntBASIC17.56■□□□□ 0.4
CBX8Q9HC52 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 EEF1DP4-201ENST00000446006 880 ntBASIC17.56■□□□□ 0.4
CBX8Q9HC52 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 AC116407.3-201ENST00000623905 1129 ntBASIC17.56■□□□□ 0.4
CBX8Q9HC52 AC004877.2-201ENST00000623941 599 ntBASIC17.56■□□□□ 0.4
CBX8Q9HC52 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 BX640514.1-201ENST00000583223 1918 ntBASIC17.56■□□□□ 0.4
CBX8Q9HC52 CYP4F24P-201ENST00000586049 1580 ntBASIC17.56■□□□□ 0.4
CBX8Q9HC52 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX8Q9HC52 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CBX8Q9HC52 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms