Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 RPL13AP25-201ENST00000484130 612 ntBASIC18.47■□□□□ 0.55
RNF41Q9H4P4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 AC090616.6-203ENST00000579186 1945 ntBASIC18.47■□□□□ 0.55
RNF41Q9H4P4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 AC084364.1-201ENST00000551967 1556 ntBASIC18.47■□□□□ 0.55
RNF41Q9H4P4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF41Q9H4P4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 MYCLP2-201ENST00000449268 967 ntBASIC18.46■□□□□ 0.55
RNF41Q9H4P4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF41Q9H4P4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF41Q9H4P4 PAUPAR-201ENST00000630360 2965 ntBASIC18.45■□□□□ 0.54
RNF41Q9H4P4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 TMEM261P1-201ENST00000604899 340 ntBASIC18.45■□□□□ 0.54
RNF41Q9H4P4 AC008494.3-201ENST00000606615 944 ntBASIC18.45■□□□□ 0.54
RNF41Q9H4P4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF41Q9H4P4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms