Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 KRT8P44-201ENST00000441609 1350 ntBASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 CICP24-201ENST00000605464 2705 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AC091951.1-201ENST00000512854 2465 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 MRPL3P1-201ENST00000400109 1033 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AP001005.1-201ENST00000571755 1248 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AC025580.3-201ENST00000617932 1424 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 BNIP3P1-202ENST00000550043 1585 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AC018892.3-201ENST00000623986 2499 ntBASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COMMD4Q9H0A8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC009090.5-201ENST00000624886 2285 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC148477.4-201ENST00000613430 1793 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AGAP7P-201ENST00000582299 2062 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AGAP14-201ENST00000624701 2060 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC126335.2-201ENST00000623362 4637 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC004987.2-201ENST00000395959 1148 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 RNA5SP415-201ENST00000517246 115 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 IGHV3-22-201ENST00000520721 359 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms