Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 AL009178.2-201ENST00000597278 2719 ntBASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.27□□□□□ -0.28
PCGF1Q9BSM1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 RPL37AP1-201ENST00000412502 279 ntBASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 AL139010.1-201ENST00000454878 894 ntBASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 AL079307.3-201ENST00000556114 283 ntBASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 TEX28P1-201ENST00000613479 1221 ntBASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 TEX28P2-201ENST00000617764 1221 ntBASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.27□□□□□ -0.29
PCGF1Q9BSM1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms