Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 FAM207CP-201ENST00000443486 507 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 SPTLC1P1-201ENST00000447199 261 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 TPRX2P-201ENST00000535362 881 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AC023310.3-201ENST00000557027 670 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AC100756.1-201ENST00000562736 682 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AC138749.3-201ENST00000567691 622 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AL391069.4-201ENST00000609583 481 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 AC116165.1-201ENST00000611806 668 ntBASIC13.04□□□□□ -0.32
GAFA1Q96PS6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
GAFA1Q96PS6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC084364.1-201ENST00000551967 1556 ntBASIC13.03□□□□□ -0.32
GAFA1Q96PS6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC046158.3-201ENST00000624947 2558 ntBASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC002472.2-201ENST00000442739 958 ntBASIC13.03□□□□□ -0.32
GAFA1Q96PS6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 MIR4745-201ENST00000577608 62 ntBASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 RN7SL204P-201ENST00000582831 262 ntBASIC13.03□□□□□ -0.32
GAFA1Q96PS6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 LINC02560-201ENST00000596379 459 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms