Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 TPM3P8-201ENST00000330554 643 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 MTX1P1-201ENST00000440904 838 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 EEF1DP1-201ENST00000585891 896 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 ECM1P1-201ENST00000604092 1279 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 PRSS30P-206ENST00000641773 873 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 AC015818.8-201ENST00000587907 1519 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 AC148477.4-201ENST00000613430 1793 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NLRP3Q96P20 MTHFR-217ENST00000641820 1569 ntBASIC19.23■□□□□ 0.67
NLRP3Q96P20 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRP3Q96P20 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.22■□□□□ 0.67
NLRP3Q96P20 RPSAP36-202ENST00000494591 1261 ntBASIC19.22■□□□□ 0.67
NLRP3Q96P20 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
NLRP3Q96P20 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.22■□□□□ 0.67
NLRP3Q96P20 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NLRP3Q96P20 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 AC005695.3-201ENST00000614522 232 ntBASIC19.22■□□□□ 0.67
NLRP3Q96P20 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.22■□□□□ 0.67
NLRP3Q96P20 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NLRP3Q96P20 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 PCDHA12-202ENST00000613593 2588 ntBASIC19.22■□□□□ 0.67
NLRP3Q96P20 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRP3Q96P20 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 CALR4P-201ENST00000431943 946 ntBASIC19.21■□□□□ 0.67
NLRP3Q96P20 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 AC104982.3-201ENST00000581995 514 ntBASIC19.21■□□□□ 0.67
NLRP3Q96P20 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 AC244452.3-201ENST00000636814 210 ntBASIC19.21■□□□□ 0.67
NLRP3Q96P20 AL662844.4-201ENST00000606367 2838 ntBASIC19.21■□□□□ 0.67
NLRP3Q96P20 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRP3Q96P20 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRP3Q96P20 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NLRP3Q96P20 AL354989.2-201ENST00000435838 1540 ntBASIC19.2■□□□□ 0.66
NLRP3Q96P20 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRP3Q96P20 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.2■□□□□ 0.66
NLRP3Q96P20 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.2■□□□□ 0.66
NLRP3Q96P20 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NLRP3Q96P20 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NLRP3Q96P20 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms