Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 RRP7BP-205ENST00000566851 833 ntBASIC16.18■□□□□ 0.18
RPRD1AQ96P16 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 AC099568.2-201ENST00000609194 695 ntBASIC16.18■□□□□ 0.18
RPRD1AQ96P16 AC007431.3-201ENST00000623221 587 ntBASIC16.18■□□□□ 0.18
RPRD1AQ96P16 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.18■□□□□ 0.18
RPRD1AQ96P16 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 KRT18P43-201ENST00000469825 1281 ntBASIC16.17■□□□□ 0.18
RPRD1AQ96P16 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AC123567.1-201ENST00000548294 1261 ntBASIC16.17■□□□□ 0.18
RPRD1AQ96P16 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 TP53TG3HP-202ENST00000569755 579 ntBASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AC008494.3-201ENST00000606615 944 ntBASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AC093726.1-201ENST00000608064 963 ntBASIC16.17■□□□□ 0.18
RPRD1AQ96P16 AL391069.4-201ENST00000609583 481 ntBASIC16.17■□□□□ 0.18
RPRD1AQ96P16 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPRD1AQ96P16 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 CLK3P2-201ENST00000427566 1453 ntBASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.16■□□□□ 0.18
RPRD1AQ96P16 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms