Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.81□□□□□ -0.36
ZNF48Q96MX3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TARDBPP1-201ENST00000442013 1203 ntBASIC12.81□□□□□ -0.36
ZNF48Q96MX3 AC245100.5-201ENST00000452108 331 ntBASIC12.81□□□□□ -0.36
ZNF48Q96MX3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF48Q96MX3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC234783.1-201ENST00000441761 496 ntBASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC036164.1-201ENST00000570544 333 ntBASIC12.8□□□□□ -0.36
ZNF48Q96MX3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 MIR6775-201ENST00000617557 69 ntBASIC12.8□□□□□ -0.36
ZNF48Q96MX3 MIR6799-201ENST00000620297 69 ntBASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC007950.2-201ENST00000615045 2347 ntBASIC12.8□□□□□ -0.36
ZNF48Q96MX3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AC068587.6-202ENST00000641839 5619 ntBASIC12.8□□□□□ -0.36
ZNF48Q96MX3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF48Q96MX3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AL365209.1-201ENST00000624418 6473 ntBASIC12.79□□□□□ -0.36
ZNF48Q96MX3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms