Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 MIR1224-201ENST00000408193 85 ntBASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PCED1CP-201ENST00000419887 785 ntBASIC13.56□□□□□ -0.24
CMTM3Q96MX0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CMTM3Q96MX0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PHKG1P2-201ENST00000457537 863 ntBASIC13.55□□□□□ -0.24
CMTM3Q96MX0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.55□□□□□ -0.24
CMTM3Q96MX0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 AC021087.4-201ENST00000563761 564 ntBASIC13.55□□□□□ -0.24
CMTM3Q96MX0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 MIR1199-201ENST00000621445 119 ntBASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMTM3Q96MX0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms