Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL139010.1-201ENST00000454878 894 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 LINC01225-203ENST00000563550 1244 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 AC097359.3-201ENST00000603982 1210 ntBASIC14.17□□□□□ -0.14
PTP4A1Q93096 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.17□□□□□ -0.14
PTP4A1Q93096 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTP4A1Q93096 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 BX842568.4-201ENST00000421222 227 ntBASIC14.16□□□□□ -0.14
PTP4A1Q93096 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 AC026120.1-201ENST00000611536 926 ntBASIC14.16□□□□□ -0.14
PTP4A1Q93096 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTP4A1Q93096 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PTP4A1Q93096 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.15□□□□□ -0.14
PTP4A1Q93096 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTP4A1Q93096 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms